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BMC Ecology and Evolution

Springer Science and Business Media LLC

Preprints posted in the last 30 days, ranked by how well they match BMC Ecology and Evolution's content profile, based on 51 papers previously published here. The average preprint has a 0.04% match score for this journal, so anything above that is already an above-average fit.

1
Macroevolutionary consequences of twin neck innovations in deep-sea dragonfishes

Santos, E. C.; Huie, J.; Capobianco, A.; Faucher, R.; Clardy, T.; Ludt, W. B.; Carnevale, G.; Arcila, D.; Martinez, C.

2026-06-25 evolutionary biology 10.64898/2026.06.21.733442 medRxiv
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The origin of novel phenotypes can influence access to new ecological resources, which may have positive, neutral, or negative effects on subsequent phenotypic diversification. In this study, we tested the macroevolutionary consequences of a pair of putative functional innovations occurring in deep-sea fishes of the order Stomiiformes. Integrating phylogenetic comparative methods, micro-CT scans, and external body measurements, we recover a mosaic of diversification trends associated with these innovations. We found some evidence for elevated evolutionary rates in tooth morphology associated with the predatory dragonfishes, which possess a gap between their vertebral column and skull that exposes the notochord and enables neck-like flexibility. However, a second novelty building upon the first, a functional neck joint enabling extreme cranial kinesis, was linked to faster rates of skull evolution. Our results suggest that innovations that help shift ecological roles and overcome functional constraints related to those roles, like gape-limitation in prey depauperate habitats, may play an important role in promoting phenotypic diversification. This work builds on a growing body of evidence highlighting how the deep sea promotes phenotypic diversity, generating the extreme forms that are celebrated by scientists and the public alike.

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An open-access CT-based 3D anatomical dataset of extant sharks across all major lineages

Yao, S.; Liu, X.; Hou, Y.; Yin, P.; Zhang, X.; Cui, X.; Lu, J.

2026-07-02 evolutionary biology 10.64898/2026.06.29.734410 medRxiv
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Sharks exhibit extraordinary morphological diversity across a wide range of ecological niches, yet large-scale, high-resolution digital datasets of their internal anatomy remain limited. Here we present an open-access 3D shark anatomical repository derived from published X-ray computed tomography (CT) data, featuring manually segmented and systematically annotated models of the chondrocranium, visceral arches, axial skeleton, musculature, and viscera in standard STL format. The dataset comprises 117 individuals, representing 72 species across 25 families and all nine extant shark orders, with 115 full-body reconstructions and two head-only models. This open-access dataset offers a comprehensive resource for comparative anatomy, biomechanical simulations, evolutionary developmental biology and biomimetics research of extant sharks.

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Convergent evolutionary selection unravels the genetic basis of audition in moths

Cinel, S. D.; Flattmann, Q.; Earl, C.; Ellis, E.; Barber, J.; Sondhi, Y.; Mhatre, N. D.; Kawahara, A. Y.

2026-07-10 evolutionary biology 10.64898/2026.07.08.736348 medRxiv
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Hearing in Lepidoptera mediates a range of ecologically important behaviours, including mate communication, predator avoidance, and acoustic signalling. In moths, the evolution of predator-prey interactions with bats has further shaped hearing through a sensory arms race, with repeated co-option of auditory organs to detect and evade echolocating predators. Despite significant prior characterization of the neurophysiology and behaviour of hearing in moths, the genetic basis of hearing is poorly understood in most insects. In this study, we identify a core set of putative auditory genes in Lepidoptera using a combination of homology-based searches from Drosophila and evolutionary rate analyses. We find 56 genes present across all species and investigate whether gene copy number varies among non-hearing and hearing lineages and among 3 different ear types. We discovered seven genes associated with ear type and one with ear presence, but did not find significant losses in gene copy number in non-hearing species. We identified three genes (btv, Dnai2, and nompB) with strong evidence of selection in hearing clades and five genes with weaker evidence of selection. We discuss the potential roles of btv, nompB, and Dnai2 in ciliary transport and the aging of hair cells, as well as the possibility of actively amplified hearing. Our study serves as a primer and resource for further gene mining and functional testing of auditory genes in moths and other insects.

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Socioecological differentiation and the evolution of brain size and synaptic architecture in predatory ants, Neoponera

Azorsa, F.; Traniello, J. F. A.

2026-07-02 evolutionary biology 10.64898/2026.06.27.735026 medRxiv
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Brain size and structure are hypothesized to be adaptively designed to satisfy the behavioral requirements of securing food and living socially. The importance of these socioecological and sociobiological selective forces in brain evolution is constantly debated. Socioecological divergence is striking in the Neotropical ant genus Neoponera: N. apicalis is a generalist solitary predator forming small colonies of ~100 whereas N. commutata colonies are approximately 10 times as large and workers pheromonally organize cooperatively raids only on Syntermes termite colonies. We interspecifically compared the size and structure of the compound eyes, size and number of antennal glomeruli, mosaic brain scaling and synaptic processing (microglomeruli-MG). Our results indicate that N. apicalis workers have a larger number of ommatidia, antennal lobe glomeruli, and allometrically larger antennal and optic lobes than N. commutata. These sensory traits were associated with differences in higher-order processing architectures in the mushroom body (MB) microglomeruli (MG). N. commutata workers had an allometrically larger MB, perhaps due to their socially complex chemical foraging communication, although MG density in N. apicalis was higher in both the MB lip and collar, regions associated with processing olfactory and visual information, respectively. The increase in MG density in N. apicalis may be associated with higher demands for navigation, learning, and memory, as well as a higher density of antennal lobe glomeruli to support prey odor discrimination. In contrast, N. commutata workers had larger ommatidia and antennal lobe glomeruli. Larger ommatidia correlate with their diurnal/nocturnal habits and a larger MB Our findings indicate that differences in behavioral performance demands associated with socioecological differentiation are reflected in variation in visual and olfactory system structure, brain size, mosaicism, and synaptic organization. Our results support both social and ecological brain hypothesis as drivers of mosaic brain evolution.

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Biomechanics of the extremely elongated neck of the Triassic archosauromorph Tanystropheus

Rytel, A.; van Bijlert, P. A.; Lautenschlager, S.; Spiekman, S. N. F.; Talanda, M.; Sulej, T.

2026-07-02 paleontology 10.64898/2026.06.28.735087 medRxiv
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Extremely elongate necks have convergently evolved in several amniote lineages, including both aquatic and terrestrial forms (Fig. 1). The development of such a feature brings with it advantages in obtaining food items, but also biomechanical challenges, such as flexibility, stability, lift, and inertia. In Tanystropheus, a particularly long-necked Triassic archosauromorph, the neck is composed of only 13, mostly extraordinarily elongated and slender cervical vertebrae and accompanying rod-like, overlapping ribs, making it arguably the most extreme example of neck elongation in tetrapod evolution (Fig. 1;1-6). Understanding the function of this remarkable neck provides insights into the limits of neck elongation in amniotes and the evolution of morphological novelties in Triassic reptiles. Here we present the first quantitative biomechanical analysis of the Tanystropheus neck using a digital model based on three-dimensionally preserved bones. We assessed its range of motion (ROM) and performed finite element analysis (FEA) on the individual cervical ribs and the neck model in different configurations. Our results indicate that the neck of Tanystropheus was not extremely stiff, as previously postulated, and the ribs likely did not impair its movements. They transferred tensile forces towards the base of the neck, similar to what hypothesized for sauropods7. This study elucidates the bauplan of an extremely specialized animal and brings us closer to understanding the patterns of achieving neck elongation in vertebrates.

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Complex interplay of biomechanics and ecology influenced crab claw morphology evolution

Bicknell, R. D. C.; Wolfe, J. M.; Flynn, J. J.; Klompmaker, A. A.; Chase, M.; Fu, P.; Hopkins, M.

2026-06-23 ecology 10.64898/2026.06.23.733945 medRxiv
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True crabs (Brachyura) are among the most iconic marine arthropods, representing noteworthy examples of morphological and ecological disparity. A striking feature of brachyurans are their anterior pincer-like appendages: chelipeds. These structures showcase a large diversity of morphologies that reflect ecology and overall multifunctionality. Yet, a comprehensive assessment of appendage functional morphology within phylogenetic and ecological trait contexts has never been attempted. By combining 3D geometric morphometrics, finite element analyses, multilocus molecular phylogeny, and ecological trait data for 80 crab species, including three fossil forms, we unveil a complex evolutionary history for crab chelipeds. Despite extreme shape diversity amongst chelipeds, stress distributions are very similar across taxa and hint a many-to-one pattern. High concentrations of chelipeds within constrained morphospace regions associated with peak pinch forces illustrates that brachyuran morphologies optimised for shell crushing may have arisen in the Cretaceous. Deviations from this morphospace highlight the diversification of non-shell-crushing life modes and the influence of sexual selection on appendages. Neither cheliped shape nor pinch force show phylogenetic signal. Together these results indicate that the evolution of cheliped shape is closely associated with, and inferred to have been strongly influenced by, crab ecology, biomechanical needs and sexual selection. SIGNIFICANCE STATEMENTChelipeds, the pincer-like claws of crabs, are among the most morphologically diverse appendages within Arthropoda, yet the evolutionary forces driving this diversity remain poorly understood. By integrating 3D geometric morphometrics, biomechanical modelling, molecular phylogeny, and ecological data across 80 crab species including fossil forms, we demonstrate that cheliped morphology is driven by ecology, biomechanical demands, and sexual selection rather than phylogenetic relatedness. The multifunctionality of these structures produces strong evidence for many-to-one mapping of form to function. Morphologies optimised for durophagy appear to have originated in the Cretaceous, with subsequent diversification into manipulative and sexually selected forms from a morphologically flexible foundation. These findings demonstrate that cheliped diversity reflects a complex interplay between ecological specialisation, biomechanical optimisation, and sexual selection across Brachyura.

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Dysregulation of pupal diapause in hybrid progenies, introgression and species delimitation within and beyond the Old World Swallowtail (Papilio machaon Linnaeus) butterfly complex

Michel, F. J.; Legal, L.; Kunte, K.; Descimon, H.

2026-07-03 evolutionary biology 10.64898/2026.06.30.735657 medRxiv
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In search of recurrent patterns of postzygotic hybrid incompatibility, we investigated the Holarctic 'Old World Swallowtail' (Papilio machaon Linnaeus) butterfly complex, whose members can easily be crossed in the laboratory. How many species this model system comprises remains unclear, as taxa with highly distinctive larvae but uncertain status come into contact with authentic P. machaon subspecies in Southern parts of the Palearctic region. By determining mitochondrial and ITS2 haplotypes within and away from contact zones, we found that these neighboring populations do exchange genes, as expected from F1 hybrids being generally fertile in our laboratory crosses. Nevertheless, recurrent instances of dysregulation of diapause were uncovered in hybrid progenies. In keeping with Haldane's Rule, pupae of the heterogametic (female) sex were either unable to enter diapause or, in reciprocal crosses, unable to resume development after having initiated diapause, whereas F1 males experienced normal, photoperiod-regulated diapause, but passed on abnormal diapause regulation to part of their female offspring when backcrossed. Comparing male and female pupal weights in hybrid progenies provides estimates of parental incompatibility that allow to rank taxa and predict quantitatively the outcome of additional crosses, as expected if the same regulatory system were involved. A survey of the entomological literature confirms that diapausing pupae that cannot resume development ('perpetual nymphs') are a recurrent feature of interspecific lepidopteran crosses. Moreover, of the two parent species of a perpetual nymph, the paternal one generally has fewer broods per year. These observations are discussed in the light of models of the speciation process.

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Relationship between gonadosomatic index and spawning-capable status based on gonadal histology in the moonfish Mene maculata

Oi, M.; Ogawa, C.; Fujii, K.; Mori, T.; Matsuo, S.; Fukuda, K.

2026-07-14 ecology 10.64898/2026.07.12.738070 medRxiv
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The moonfish Mene maculata (Bloch and Schneider, 1801), the sole extant species of the family Menidae, is widely distributed in the Indo-West Pacific. Although its spawning season has previously been inferred from seasonal variation in the gonadosomatic index (GSI), the histological basis for interpreting GSI as an indicator of spawning-capable status remains limited. Here we describe the gonadal structure of male and female M. maculata and evaluate how GSI and standard length relate to spawning-capable status based on germ cell development. The testis was lobular and exhibited an unrestricted spermatogonial distribution, a structure widely observed among neoteleosts, indicating that the phylogenetic distinctiveness of M. maculata was not associated with a distinctive testicular structure. In the spawning-capable female, oocytes at multiple developmental stages, from primary growth to oocyte maturation, co-occurred within the ovary, indicating asynchronous ovarian development. This finding suggests that M. maculata may be a batch spawner rather than a total spawner as previously inferred. The spawning-capable female had a GSI consistent with previously inferred spawning season estimates. By contrast, histologically examined males were spawning capable at GSI values lower than those previously associated with the inferred spawning season, suggesting that male spawning-capable status may persist beyond the period inferred from elevated GSI alone. This study provides the first histological description of reproductive biology in the phylogenetically distinctive M. maculata and establishes a histological basis for interpreting GSI as a reproductive indicator.

9
Color polymorphism in the saddleback clownfish, Amphiprion polymnus: species or complex?

Fitzgerald, L. M.; Coulmance, F.; Marcionetti, A.; Gaboriau, T.; Garcia Jimenez, A.; Apag, P. T.; Versteeg, M.; Noble, F. J.; Gaffney, K.; Mercader, M.; Diola, A. G.; Geraldino, P. J.; Rueger, T.; Laudet, V.; Salamin, N.

2026-06-29 ecology 10.64898/2026.06.28.735040 medRxiv
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Color polymorphism can facilitate local adaptation, maintain intraspecific diversity, or reflect early stages of speciation. Clownfishes (Amphiprion spp.) typically display a simple black, orange, and white pattern, but the saddleback clownfish (Amphiprion polymnus) shows striking variation in melanism and the number of vertical bars, which are thought to play a role in species recognition. In 2024, a revision on iNaturalist split A. polymnus into multiple species based solely on color pattern and geographic range. This raises the question of whether these morphs represent true species or intraspecific polymorphism, which we tested using genomic and image-based data. We sampled 97 individuals from seven populations across the species range and quantified color patterns from standardized photographs. Phenotypic and genomic analyses reveal a complex pattern of divergence. Image analysis identified three distinct phenotypic clusters, with A. polymnus, A. annamensis, and A. laticlavius each showing consistent differences in saddle shape and vertical bar extent. ADMIXTURE resolved three distinct genetic groups corresponding to the morphs. Pairwise FST (0.54-0.71) and dxy indicate extremely high differentiation between A. polymnus and A. annamensis, consistent with species-level divergence, whereas A. laticlavius shows much lower differentiation from A. polymnus (FST 0.09-0.18) and higher differentiation from A. annamensis (FST 0.64-0.66). Overall, phenotypic and genomic data show structured variation, but the status of A. laticlavius remains ambiguous. Our study reveals clear and structured divergence across the full range, yet the taxonomic interpretation of this variation remains inherently challenging. The key question remains: do these patterns reflect a single polymorphic species or a complex of closely related species?

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Differential selection between sexes and the evolution of recombination in haplodiploids

Patel, V.; Roze, D.

2026-07-03 evolutionary biology 10.64898/2026.06.29.735359 medRxiv
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Eusocial Hymenoptera present the highest known recombination rates among metazoans, which evolved several times independently among bees, ants and wasps. Several hypotheses have been proposed to explain this observation, including stronger selection for recombination caused by coevolving parasites and pathogens, and strong sexual selection among haploid males due to male-biased sex ratios among reproductive individuals. In this article, we explore the effects of haplodiploidy and differential selection between sexes on the evolution of recombination, by analyzing a three-locus model in which selection for recombination stems from negative epistasis between selected loci. Our analytical predictions are compared with the results of individual-based simulations in which deleterious mutations occur along a linear chromosome. Our results show that, at mutation-selection balance for deleterious alleles, increasing the strength of selection against deleterious alleles (due to the effect of male haploidy and/or sexual selection) tends to reduce selection for recombination. However, an increase in the overall magnitude of negative epistasis (which may also be due to male haploidy and/or sexual selection) combined with the fact that recombination only occurs in females may increase selection for recombination substantially. Our model also shows that, in conditions favoring recombination, increasing recombination in meioses leading to parthenogenetic ovules (and male offspring) may yield stronger benefits than in meioses leading to fertilized ovules (and female offspring).

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The contribution of recent and historical demographic histories to genomic diversity and conservation status in plant species

Tao, T.; Li, P.; Zhu, Y.; Zhang, S.; Zhang, M.; Lascoux, M.; Chen, J.

2026-06-29 evolutionary biology 10.64898/2026.06.24.734111 medRxiv
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Demographic factors are intrinsically crucial to evaluate species' extinction risk. However, measuring them remains difficult and time-consuming and the use of genomic summary statistics has been advocated to assess the conservation status of a species. In the present study, we estimated (i) the census number (Nc), (ii) effective population size (Ne) over three different time periods, recent, historical and ancient, (iii) neutral genetic diversity ({pi}4), and (iv) a measure of the efficacy of purifying selection ({pi}0/{pi}4) for 101 plant species using population genomic sequencing data. Twenty-one species are from the Plant Species with Extremely Small Populations (PSESP) program of SW China. Threatened species exhibited significantly lower Ne, Nc, {pi}4, and weaker purifying selection, but had a higher Ne/Nc ratio than non-threatened ones. Nc was the main determinant in identifying conservation status, and contemporary neutral genetic diversity was predominantly influenced by historical Ne. In the absence of demographic information, genetic parameters are a good proxy of conservation status, likely because currently threatened species also had a low historical population size. In summary, our findings suggest that direct estimates of Nc are more useful than {pi}4, although the latter remains a valuable conservation indicator. Hence, efforts such as the PSESP should be extended.

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DNA barcoding and olfactory identification of attractive nectar sources for Aedes aegypti mosquitoes

Jandu, S.; Patil, A.; Paik, J.; Mosore, M.-t.; Kline, D.; Norris, E.; Burgess, E. R.; Riffell, J. A.

2026-06-22 ecology 10.64898/2026.06.19.733381 medRxiv
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Adult mosquitoes rely on plant-derived sugars for survival, reproduction, and flight, yet the plant taxa that mosquitoes encounter in nature and the odors that make those plants attractive remain poorly understood. Most studies of mosquito attraction to plant odors have focused on candidate plants selected a priori, rather than plants linked to field-collected mosquitoes. Here, we combined plant DNA barcoding, semi-field behavioral assays, and volatile profiling to identify field-associated plant resources relevant to Aedes aegypti. Plant DNA recovered from mosquitoes collected across three Florida counties revealed broad plant associations, including 90 genera spanning 37 families, with several taxa recurring across counties or appearing prominently within particular localities. Behavioral experiments in semi-field sticky-trap assays found that five field-associated plant taxa were significantly attractive relative to blank controls, indicating that taxa associated with mosquitoes in nature can also function as attractive cues under semi-field conditions. GC-MS analyses of headspace collections from 42 plant taxa detected 211 volatile compounds and revealed substantial variation in both total emission rate and odor composition among taxa. Although several compounds, including -pinene, limonene, 4-ethylacetophenone, 2-ethyl-1-hexanol, 4-ethylbenzaldehyde, and caryophyllene, were broadly distributed across plant groups, volatile profiles differed significantly among taxa and shared compounds often occurred at markedly different proportional abundances. The five behaviorally tested taxa likewise showed both overlap and divergence, sharing 17 compounds across all five taxa while differing in dominant constituents and total emissions. Together, these results show that Ae. aegypti interacts with a diverse set of plants in the field, and suggests nectar-seeking is shaped not simply by plant identity or total odor abundance, but by the composition and proportional structure of plant odors.

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Redefining accessible food resources for paleodietary reconstruction in Britain: baseline recommendations based on isotopic data synthesis

Chen, Z.; Millard, A.; Fernandez Dominguez, E.

2026-06-26 ecology 10.64898/2026.06.25.734399 medRxiv
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Paleodietary reconstruction requires isotopic data from both humans and their accessible food resources. However, ideally defined accessible food resources, namely those from the same sites and periods as the target human individuals, are not always available for all ancient individuals. The number of sites with human C/N isotopic data far exceeds that with food-resource isotopic data. Consequently, many individuals cannot be linked to corresponding accessible food resources, a limitation that becomes more pronounced in large-scale quantitative dietary reconstructions incorporating a wide range of food-resource categories. Therefore, this study aims to broaden the definition of accessible food resources. To achieve this aim, we compiled food-resource and soil isotopic data ({delta}13C and {delta}15N) from Britain, including 4,012 ancient faunal and plant remains, 394 modern plant samples, and 260 modern soil samples. Region-period combined groups were established for the five major food-resource categories and served as the basic analytical units for detailed isotopic comparisons. Based on these comparisons, we propose broader criteria for defining accessible food resources. No significant intra-group variation was observed in the isotopic values of terrestrial herbivores and omnivores, suggesting that animals within each region-period combined group can serve as accessible food resources for humans from the same group. C3 plants showed substantial spatial variation but limited temporal variation. Accordingly, accessible food resources for C3 plants should be defined by region, namely England, Wales, and Scotland, regardless of chronological period, with humans from each region assigned plant data from their respective region. Marine and freshwater fish showed no clear temporal or spatial variation, and therefore unified datasets can be applied across all human individuals. Our findings enable each ancient human individual to be assigned appropriate accessible food resources, and therefore appropriate food-resource isotope baselines. We further demonstrate that such assignments can effectively reduce sampling bias arising from the use of traditionally defined accessible food resources, which are often limited by small sample sizes.

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The role of stridulations during the mating of Nicrophorus vespilloides

Guggenberger, M.; Gerke, S.; Conrad, T.

2026-07-04 animal behavior and cognition 10.64898/2026.06.30.735517 medRxiv
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In many insect species, mating is coordinated through multimodal signaling, yet less obvious channels are often overlooked. In the burying beetle Nicrophorus vespilloides, chemical communication is well-documented, but the role of substrate-borne vibrational signals (stridulations) during courtship remains unknown. We investigated whether stridulation is essential for mating success through two sets of experiments. First, we found a positive correlation between the frequency of stridulations and both the number and duration of copulation events. Second, we employed a silencing experiment to test the necessity of these signals by silencing males, females, or both partners. We found no significant differences between silenced and control groups regarding the frequency or duration of physical contact and mounting events, suggesting that stridulation is not required for mate recognition or the initiation of courtship. However, the proportion of successful copulations relative to mounting events was significantly lower when females were silenced. These results suggest that while N. vespilloides relies on a redundant multimodal system that likely utilizes chemical cues to initiate mating, vibrational signals, particularly from the female, may play a critical role in facilitating successful copulation. This study provides the first evidence for the role of stridulation in the mating behavior of N. vespilloides and highlights the potential for female-mediated vibrational signaling in burying beetle courtship.

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A Practical Roadmap For Sampling Floral Nectar From Communities of Many Plant Species

Kirschke, G. E.; Bain, J. A.; Ogilvie, J. E.; CaraDonna, P. J.

2026-06-23 ecology 10.64898/2025.12.19.695174 medRxiv
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O_LIFloral nectar plays a critical role in shaping the ecology and evolution of plant-pollinator interactions. Effective and efficient methods that allow for broad-scale sampling of nectar volume and sugar concentration across a diversity of taxa are needed to improve our understanding of many dimensions of mutualistic plant-pollinator interactions--including their basic ecology and evolution, their responses to environmental change, and their conservation and restoration. C_LIO_LIDespite the key importance of nectar for mediating plant-pollinator interactions, quantifying floral nectar in the field from many different plant species is challenging because there is often no one-size-fits-all sampling method that is effective across a diversity of floral structures and nectar traits. Different methods require different preparation, and sampling from many species involves a variety of logistical challenges. C_LIO_LIHere we provide a methodological roadmap for sampling floral nectar in the field from many different plant species. We describe our nectar collection methods in detail, including necessary equipment, calculations, and approaches appropriate for different floral morphologies. We also provide a troubleshooting guide for common problems encountered while collecting nectar in the field. To demonstrate the utility and effectiveness of our methods for collecting nectar from many different species, we present results on nectar trait variation from 53 species in an ecosystem. C_LIO_LIOur method illustrates that nectar traits vary considerably within and among plant species, indicating that large-scale nectar sampling projects are an important consideration for many basic and applied questions in pollination ecology and evolution. We hope that across many plant communities and ecosystems, our paper provides a practical roadmap for how to navigate the complexities of quantifying floral nectar traits. C_LI

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Pollination responses to artificial light at night may vary with lighting arrangement

Li, D.; Adeniji, L. A. J.; Meah, R. J.; Clements, C. F.

2026-07-10 ecology 10.64898/2026.07.10.737511 medRxiv
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Artificial light at night (ALAN) can alter the movement of nocturnal pollinators such as moths, with potential consequences for pollination services. However, most studies have focused on the presence or properties of lights, while the role of spatial lighting configuration remains poorly understood. We conducted a small-scale field experiment to test how different lighting configurations affect pollination success in moth-pollinated plants, using low-intensity LED garden lights. Potted phytometer plants of three moth-pollinated species were exposed to one of three treatments: no-light control, isolated LED point lights, or 25 m linear arrays of multiple LED lights. We quantified pollination success as both the probability of seed set and reproductive output through seed and capsule production. Experimental lighting affected plant reproductive success, with light arrays increasing seed-set probability, seed and seed capsule number relative to unlit controls, whereas point lights showed no clear effect. These results provide preliminary evidence that the spatial configuration of artificial lights may influence nocturnal pollination outcomes. Future work combining phytometer assays with direct tracking of moth movement is needed to assess whether light arrays facilitate or redirect the dispersal of nocturnal pollinators.

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How Robust are Multispecies Coalescent Species Delimitations in Taxonomically Complex Systems? A Genomic Assessment Using Mediterranean Tethya Sponges

van der Sprong, J.; Cardone, F.; Hoehna, S.; Schaetzle, S.; Deister, F.; Erpenbeck, D.; Woerheide, G.; Vargas, S.

2026-07-05 evolutionary biology 10.64898/2026.07.04.735074 medRxiv
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Reliable species delimitation underpins biodiversity assessment but remains difficult for organisms with plastic morphology and few diagnostic characters. Multispecies coalescent (MSC) methods can delimit species from genomic data, yet they are rarely tested in taxonomically complex, marine invertebrate groups where they are arguably most needed. We used the three Mediterranean species of the genus Tethya, a rare, well-characterised system within the otherwise taxonomically difficult phylum Porifera-distinguished by multiple independent morphological and ecological characters-to evaluate how robust MSC-based delimitation is in such groups. Analysing 64 single-copy nuclear loci in BEAST2 and BPP, we compared constrained, hypothesis-testing approaches (BFD*, BFdriver, A10) with freer, heuristic ones (SPEEDEMON, A11), and examined their sensitivity to data type, clock model, priors, and the species-collapse threshold. All methods recovered the three recognised Mediterranean species, but the resolution of within-lineage structure was method-dependent. The hypothesis-testing approaches consistently supported six lineages, robustly across data types and model assumptions, whereas the heuristic approaches proved less stable. Configurations without a priori species hypotheses often failed to converge or were computationally intractable, a problem compounded by the relaxed clock. In SPEEDEMON the outcome changed with the collapse threshold. Because our system lacks an independent reference point to calibrate this threshold, any delimitation based on it is poorly constrained. We conclude that constrained, hypothesis-testing delimitation is the most robust and reproducible MSC approach, yielding a quantitative, model-based hypothesis that can be weighed against other lines of evidence to inform taxonomic decisions. By clarifying how these methods behave and how their outcomes should be interpreted, our study offers a practical guide for researchers working on comparably complex systems.

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Chromosome-level genome assembly of Calotes wangi with dynamic colour variation

Qiu, X.; Wang, Y.; Wen, J.; Chen, Y.; Zhao, L.; Jian, J.; Yang, W.

2026-07-10 evolutionary biology 10.64898/2026.07.07.736949 medRxiv
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The Wangs garden lizard, Calotes wangi, is a widely distributed agamid species in Southern China and Northern Vietnam and exhibits pronounced colour variation and rapid body colour change. Despite increasing interest in the genomic basis of colour variation, chromosome-level genomic resources remain limited in agamid lizards. Here, we generated a chromosome-level reference genome of C. wangi using PacBio HiFi sequencing and Hi-C scaffolding. The final genome assembly was approximately 1.66 Gb in size and comprised 6 macrochromosomes and 11 microchromosomes, with a contig N50 of 110.09 Mb and 98.9% complete BUSCO genes. A total of 20,442 protein-coding genes were annotated. Comparative genomic analyses identified 297 significantly expanded gene families, with enriched functions associated with steroid metabolism, chromatin regulation, and epigenetic processes. This high-quality genome assembly provides an important genomic resource for future studies of colour variation, phenotypic plasticity, and evolutionary diversification in agamid lizards.

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Environmental tolerance, species interaction, and the link between the fundamental and realized niches: Insights from a hypersaline planktonic system

Guyot, L.; Fereol, S.; Jabbour-Zahab, R.; Chevin, L.-M.

2026-06-27 ecology 10.64898/2026.06.26.734780 medRxiv
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The impacts of a changing abiotic environment on fitness and performance arise not only from low tolerance to new environmental conditions, but also from changes in the abundance and interaction intensity with other species. The strength of the interaction may itself depend on how well each species performs across environments, but there is a dearth of studies investigating how intrinsic fitness and interaction intensity covary across an abiotic environmental gradient. We addressed this question in a hypersaline consumer-resource system: the microalga Dunaliella spp. grazed by the brine shrimp Artemia franciscana. We exposed four Dunaliella strains to a range of salinities above seawater, with or without brine shrimps, and tracked their population sizes over time and the survival of their predators, to estimate basic parameters of a Lotka-Volterra model. We found that the intrinsic growth rate of algae, the survival rate of predators, and the per-capita predation rate, all varied with salinity and algal strain. Significant interactions between strain and salinity further revealed that these ecological responses to salinity are evolvable. Together with correlations between demographic parameters across salinity, this suggests that predation may influence the evolution of salinity tolerance curves, blurring the line between the fundamental and realized niches.

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Interspecific variation in reproductive and foraging traits for raptors breeding in Norway

Sandvik Halgunset, E.; Mellard, J.

2026-06-29 ecology 10.64898/2026.06.28.734957 medRxiv
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Arctic and Boreal raptor communities will continue to be affected by borealization and other climate change related processes, providing a challenge for ecologists predicting future sates. However, by using community assembly theory and species traits, future communities may be predictable. In this study, we analyzed variation in reproduction traits as a consequence of diet specialization for 29 raptors, 2 skuas and 3 corvids. We assessed and implemented foraging traits for specialists and generalists into predator-prey models from which successful invasion conditions were derived. Specialist raptors produced larger clutch sizes, had a higher proportion of fledged per clutch and also expressed more variation compared to generalist raptors. These results suggest a relationship between diet specialization and reproductive traits which was also observed within phylogenetic orders. Specialist owls (Strigiformes) produced higher clutch sizes with a larger clutch range compared to generalist owls. The same pattern was observed for falcons (Falconiformes). No clear difference in reproduction was observed for specialist and generalist hawks, kites and eagles (Accipitriformes). Corvids expressed clutch sizes similar to that of specialist raptors while having the lowest proportion of fledged per clutch. Differences in foraging traits between specialists and generalists could be distinguished using functional response curves. A predator-prey model parameterized with foraging trait data showed that a generalist can coexist with a resident specialist if it has access to prey unavailable to the resident specialist. Otherwise, the native specialist outcompetes the invading generalist due to foraging efficiency. The combined empirical and theoretical findings in this study show how diet specialization affects both reproduction and the potential invasion success of raptors.